rs6684690 chr1:220444745 G>C

Sequence
caaccctgttttctgttgtttaag[G/C]gtttatcaagacgataagtgcata
ASB in cell types
ISt-1 (Gastric carcinoma)
ASB for transcription factors
HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN -3.85 2.23 1.008.0·10-3 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Lung Nerve_Tibial Thyroid

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