rs6687391 chr1:223684237 G>A

Sequence
taacaaggaccaggaggcaccaga[G/A]acaaacccagctcctcactgcagc
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.49 0.74 0.740.03 1.20 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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