rs6688325 chr1:111283553 C>T
- Sequence
taatcaattaaatattctcattta[C/T]taaaaaacttgcctatttattaac
- ASB in cell types
- MCF10A (breast epithelial cells)
- ASB for transcription factors
- SATB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SATB1_HUMAN | 0.12 | 1.65 | 1.00 | 4.52 | Concordant |
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Motif analysis
