ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs6690675
chr1:4550088
A
>
G
Sequence
ttgttattcgaagatgtacctggt[A/G]tcatatttcacctaaatgctttca
ASB in cell types
WA01 (H1, human embryonic stem cells)
ASB for transcription factors
REST_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN
2.57
-0.22
8.5·10
-3
1.00
1.17
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol change with statins
,
total cholesterol
,
urinary albumin-to-creatinine ratio
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)