rs6691468 chr1:53326326 C>G

Sequence
cggtgcccccgcgcccagggaacc[C/G]gaatactacacatccgtctgctcc
ASB in cell types
HepG2 (hepatoblastoma) CD14+ monocytes primary B-CLL cells
ASB for transcription factors
GABP1_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GABP1_HUMAN -2.38 2.78 1.005.8·10-4 1.00 n/a n/a
STAT1_HUMAN 2.16 -0.17 8.7·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP infant head circumference
GTEx eQTL Adrenal_Gland Brain_Caudate_basal_ganglia Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Esophagus_Mucosa Esophagus_Muscularis Lung Nerve_Tibial Spleen Whole_Blood

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