rs6691776 chr1:116934764 G>T

Sequence
ttaattgaacactgaaaaattgta[G/T]tggctttgtatgatgtcatcttct
ASB in cell types
MS-1 (Small cell lung carcinoma)
ASB for transcription factors
CTCF_HUMAN ATF7_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.74 2.27 1.000.02 1.08 n/a No Hit
ATF7_HUMAN n/a 1.76 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins
GTEx eQTL Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Nerve_Tibial

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