rs6691924 chr1:54488572 C>T
- Sequence
atcgcgtaaccatagtatccaaac[C/T]gtgtccgcgcggggccccagcctg
- ASB in cell types
- CD14+ monocytes breast tumor
- ASB for transcription factors
- STAT1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -0.46 | 1.99 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | -0.38 | 1.94 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, hdl cholesterol, height, homa-b, premature ovarian failure, rheumatoid arthritis, serum creatinine, waist hip ratio