rs6692079 chr1:18415704 T>C
- Sequence
ataagacaggatgcagtaaagaag[T/C]tggccaaagtccatcaaaaccaag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN MTG16_HUMAN REQU_HUMAN COT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 2.30 | -2.10 | 1.00 | -1.21 | Weak Concordant | |||
| MTG16_HUMAN | 1.74 | -1.55 | 1.00 | n/a | n/a | |||
| REQU_HUMAN | 2.56 | -0.31 | 1.00 | n/a | n/a | |||
| COT1_HUMAN | 2.41 | -2.01 | 1.00 | n/a | No Hit |
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Motif analysis
