rs6692334 chr1:36362399 G>A

Sequence
aggatacaggagtgggccaggcaa[G/A]gggcaaggaccttcatggtaggag
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
ZFX_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN -0.40 1.96 1.000.04 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  cystatin c in serum,  fasting blood glucose,  hdl cholesterol,  height,  rheumatoid arthritis,  serum creatinine
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Colon_Transverse,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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