rs6692599 chr1:24768223 T>C

Sequence
attcctgaactcaagtaatcccct[T/C]gtggtggcgtcccaaagtgctggg
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.68 -1.09 4.4·10-31.00 1.00 1.69 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) birth weight height triglycerides
GTEx eQTL Heart_Atrial_Appendage Pancreas Whole_Blood

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