rs6692892 chr1:219209850 T>C

Sequence
ccctgaacaggagggtctgtgtat[T/C]ttaatctgcatatatccagtgact
ASB in cell types
CHL-1 (Melanoma)
ASB for transcription factors
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 1.48 0.25 1.3·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. alzheimers disease without psychotic symptoms),  eye color,  hdl cholesterol,  height,  parkinsons disease,  schizophrenia
GTEx eQTL Nerve_Tibial,  Thyroid,  Whole_Blood

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