rs6693795 chr1:229221646 A>G
- Sequence
aaggagtcaagtggagatcactgg[A/G]aagtaaacactgcaaaacctccaa
- ASB in cell types
- HEK293 (embryonic kidney) VCaP (prostate carcinoma) HEK293T (embryonic kidney) CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- ZN366_HUMAN FOXA1_HUMAN ZBT44_HUMAN ZN549_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN366_HUMAN | 2.00 | n/a | 3.00 | n/a | n/a | |||
| FOXA1_HUMAN | 1.39 | 1.32 | 1.73 | -2.24 | Concordant | |||
| ZBT44_HUMAN | 1.14 | n/a | 3.00 | n/a | No Hit | |||
| ZN549_HUMAN | 1.64 | n/a | 3.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.13 | 0.65 | 1.61 | -1.33 | Weak Concordant |
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Motif analysis
