rs6695632 chr1:206935822 G>A
- Sequence
ggctgcggggaatcgtggactctg[G/A]aagcacagacagagatgggatggg
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.66 | 1.92 | 1.14 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Lung, Muscle_Skeletal, Small_Intestine_Terminal_Ileum, Spleen, Thyroid, Whole_Blood