rs6696083 chr1:77540805 A>G
- Sequence
agtaacacatacttgctttataaa[A/G]tatagaaaactggtcaggtgtggt
- ASB in cell types
- BEAS-2B (bronchial epithelium) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.74 | 1.16 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Muscularis, Minor_Salivary_Gland, Muscle_Skeletal, Thyroid