rs6698088 chr1:183989308 T>G
- Sequence
ggacatggatgattaaactctgag[T/G]ggggatgtccagcactgcctcatg
- ASB in cell types
- MDM(monocyte derived macrophages) BEAS-2B (bronchial epithelium) CD14+ monocytes monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- SPI1_HUMAN TF65_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.55 | -0.53 | 1.33 | -0.41 | Weak Concordant | |||
| TF65_HUMAN | 2.32 | -0.05 | 2.17 | -0.66 | Weak Concordant | |||
| STAT1_HUMAN | 1.71 | 0.10 | 2.00 | n/a | No Hit |
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Motif analysis
