rs6698455 chr1:246939040 G>A
- Sequence
ctagaacactcactgtactctact[G/A]tagactttatcaatactgcacaca
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.66 | -0.05 | 1.80 | -1.87 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Thyroid, Whole_Blood