rs6699598 chr1:229661172 C>A
- Sequence
agtctggtggcgccatttcttgtt[C/A]acaattggagatgggtgttggtgt
- ASB in cell types
- bipolar neuron IPSC-derived bipolar neuron GM23338
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.93 | 0.68 | 1.22 | -0.70 | Weak Concordant | |||
| STAG1_HUMAN | 0.49 | 1.17 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
