rs6699725 chr1:161733735 C>T

Sequence
ctaacttgcttttgacttctgctc[C/T]aggaatgttgctacacaagtctga
ASB in cell types
MDM(monocyte derived macrophages)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MDM(monocyte derived macrophages) -0.11 2.85 1.001.5·10-4 1.69
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  hypertension (early onset hypertension),  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Coronary,  Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Cells_Cultured_fibroblasts,  Lung,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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