rs6700998 chr1:152461533 T>G

Sequence
tcattttaggttttactaactcac[T/G]cttatcctttaatctggccacaca
ASB in cell types
H929 (plasma cell myeloma) MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
H929 (plasma cell myeloma) 2.27 -3.82 1.2·10-31.00 1.50
MCF7 (Invasive ductal breast carcinoma) 1.02 -0.03 0.010.96 2.65
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp) endometriosis hair morphology (curly) microalbuminuria parkinsons disease spine bone mineral density (bmd) stabilized warfarin dose systolic blood pressure (sbp)
GTEx eQTL Esophagus_Mucosa Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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