rs6701372 chr1:236882904 C>G

Sequence
tgtgggtaactgctggtgacactt[C/G]aggagccagtggtataatttgttt
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN n/a 2.28 1.006.1·10-3 2.00 1.99 Weak Concordant
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Motif analysis

PKNX1_HUMAN Weak Concordant
PKNX1_HUMAN pic

Genetic associations

GRASP college completion,  hdl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Ovary,  Spleen

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