rs6701583 chr1:59718241 C>G

Sequence
ttctgatccagacattctttctat[C/G]agatcacactgcctcctgttggtg
ASB in cell types
adrenal gland pancreas thoracic aorta Peyer's patch
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.25 2.60 1.004.1·10-139 1.38 n/a No Hit
RAD21_HUMAN -0.36 1.73 1.002.4·10-7 1.31 n/a n/a
STAG1_HUMAN -2.95 1.41 1.003.9·10-7 2.12 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP waist hip ratio

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