rs6702579 chr1:15230085 C>T
- Sequence
ggaagtttacagcatccctagcct[C/T]caccactagatgccagaagcactg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- ESR1_HUMAN GATA3_HUMAN CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.36 | 1.08 | 2.14 | n/a | No Hit | |||
| GATA3_HUMAN | 1.90 | n/a | 2.00 | n/a | No Hit | |||
| CTBP1_HUMAN | 2.94 | -5.17 | 2.00 | n/a | n/a |
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