rs6703628 chr1:206656883 T>C
- Sequence
caaaacaaaacaacaaaaacccca[T/C]gatcaaaggcaccacaaaccagga
- ASB in cell types
- ICN12 (primary pre-B acute lymphomablastic leukemia)
- ASB for transcription factors
- PBX1_HUMAN TFE2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PBX1_HUMAN | 3.05 | n/a | 2.00 | n/a | No Hit | |||
| TFE2_HUMAN | 3.12 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Gastroesophageal_Junction, Heart_Left_Ventricle, Lung, Nerve_Tibial, Pituitary, Thyroid