rs6703722 chr1:181127062 C>A
- Sequence
ccctggaaatcccccagcctacgc[C/A]ggcttgttgttgtcctgcagccct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HEK293 (embryonic kidney) MM1.S (plasma cell myeloma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- ESR1_HUMAN TF65_HUMAN IKZF1_HUMAN GATA3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.61 | 1.66 | 1.83 | n/a | No Hit | |||
| TF65_HUMAN | -0.05 | 1.95 | 2.06 | n/a | No Hit | |||
| IKZF1_HUMAN | 3.68 | n/a | 2.00 | n/a | n/a | |||
| GATA3_HUMAN | -0.41 | 2.46 | 1.83 | n/a | No Hit | |||
| NCOA3_HUMAN | -0.56 | 2.21 | 2.00 | n/a | n/a |
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