rs67082123 chr10:72321458 C>T
- Sequence
ggctcctcccaaaagagtcagaga[C/T]ccctgcaccctcagccgaccccag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- THA_HUMAN RFOX2_HUMAN IKZF1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| THA_HUMAN | -4.24 | 3.92 | 1.00 | n/a | No Hit | |||
| RFOX2_HUMAN | 3.43 | -4.79 | 1.25 | n/a | n/a | |||
| IKZF1_HUMAN | 0.25 | 2.42 | 1.88 | n/a | n/a | |||
| NCOR1_HUMAN | 0.34 | 3.33 | 1.00 | n/a | n/a | |||
| KDM1A_HUMAN | -0.53 | 2.93 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Nerve_Tibial, Thyroid, Whole_Blood