rs6770635 chr3:11770676 C>T
- Sequence
gaacgattggctggcagctgagac[C/T]ggctgagccacataccaggaaggt
- ASB in cell types
- monocytes from periferal blood GM12878 (female B-cells lymphoblastoid cell line) HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN189_HUMAN ZN317_HUMAN SRBP2_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN189_HUMAN | 2.06 | n/a | 2.00 | n/a | No Hit | |||
| ZN317_HUMAN | 2.72 | -4.94 | 2.00 | -0.67 | Weak Concordant | |||
| SRBP2_HUMAN | 2.14 | n/a | 3.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.34 | -0.08 | 2.00 | n/a | No Hit |
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Motif analysis
