rs67729048 chr12:31119404 G>T
- Sequence
ctcttaggagccccatcgcagggt[G/T]ggaggccacccggcgaggcgagga
- ASB in cell types
- HEK293 (embryonic kidney) H9 bipolar neuron HS-SY-2(Monophasic synovial sarcoma)
- ASB for transcription factors
- PATZ1_HUMAN MAZ_HUMAN ZN398_HUMAN ZBT10_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PATZ1_HUMAN | 3.35 | n/a | 2.00 | -2.20 | Concordant | |||
| MAZ_HUMAN | 4.30 | n/a | 2.00 | -2.70 | Concordant | |||
| ZN398_HUMAN | 3.96 | n/a | 2.00 | n/a | n/a | |||
| ZBT10_HUMAN | 2.80 | n/a | 2.00 | n/a | n/a | |||
| GLIS3_HUMAN | 2.71 | n/a | 1.50 | -3.15 | Concordant |
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Motif analysis
