rs679928 chr11:94660123 C>T
- Sequence
ctttaaagactgtacatttgtaca[C/T]actgttcccttgacctggaatact
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.39 | -0.44 | 1.50 | -1.15 | Weak Concordant | |||
| ANDR_HUMAN | 1.00 | 0.31 | 1.32 | 0.64 | Weak Discordant |
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Motif analysis
