rs680198 chr1:201494312 T>C
- Sequence
tatggtcagtgattaagcaacatc[T/C]gagagcaaagagaggggcccttag
- ASB for transcription factors
- TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -0.06 | 1.74 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, irritible bowel syndrome, ldl cholesterol, lp-pla2 mass, schizophrenia, tetrology of fallot, total cholesterol
GTEx eQTL Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood