rs680436 chr11:22668658 T>C
- Sequence
ctcaaactttcgagtatggtgaaa[T/C]acctggtcttatattaaccctaag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MM1.S (plasma cell myeloma)
- ASB for transcription factors
- BRD4_HUMAN IKZF1_HUMAN IKZF2_HUMAN HTF4_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | -3.60 | 3.02 | 1.38 | n/a | n/a | |||
| IKZF1_HUMAN | -0.69 | 2.42 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | -0.76 | 2.02 | 1.00 | n/a | n/a | |||
| HTF4_HUMAN | -1.95 | 2.33 | 1.00 | 5.79 | Concordant | |||
| COT1_HUMAN | -1.70 | 2.26 | 1.00 | n/a | No Hit |
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Motif analysis
