rs680454 chr3:21894683 A>T
- Sequence
ctccctccagtggctaagttagca[A/T]ccacagatctgaaatgtctatttt
- ASB in cell types
- THP-1 (acute monocytic leukemia) pancreas GM19099 (female B-cells Lymphoblastoid Cell Lines) glioblastoma cells
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.95 | 0.58 | 1.25 | n/a | No Hit | |||
| RAD21_HUMAN | 0.95 | 0.33 | 1.32 | n/a | n/a |
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