rs681382 chr6:160950768 G>A
- Sequence
tagaaacaagttaaatgatgactc[G/A]ggcctggtgttgtgctatatttta
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney) LNCaP (prostate carcinoma)
- ASB for transcription factors
- SSXT_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SSXT_HUMAN | n/a | 3.27 | 1.00 | n/a | n/a | |||
| FOXA1_HUMAN | -0.61 | 1.12 | 1.56 | n/a | No Hit |
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