rs681602 chr18:61952510 C>T
- Sequence
gacagggagcagacagcattttta[C/T]ccacggatccatgaatcatcacca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- COE1_HUMAN GCR_HUMAN MEF2B_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COE1_HUMAN | 3.67 | n/a | 1.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.61 | -0.12 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | 2.24 | n/a | 1.50 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.38 | -0.69 | 1.00 | n/a | n/a | |||
| SKIL_HUMAN | 2.72 | -2.38 | 1.00 | n/a | n/a |
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