rs682658 chr1:22642322 G>T

Sequence
tgcagtatccatcatttcttctcg[G/T]cccaggcttccacccaccagggac
ASB in cell types
erythroid cells glioblastoma cells

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
erythroid cells -5.32 3.14 1.008.6·10-4 2.00
glioblastoma cells -3.01 1.96 1.004.1·10-3 1.50
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  fasting insulin,  homa-ir,  infant head circumference,  response to lithium treatment for bipolar disorder,  triglycerides,  variant creutzfeldt-jakob disease
GTEx eQTL Skin_Sun_Exposed_Lower_leg

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