rs685211 chr2:67451726 G>A

Sequence
cctgctagagaataagggacatga[G/A]ccatgcttaagtcatcccagtcat
ASB in cell types
HEK293 (embryonic kidney) foreskin keratinocyte
ASB for transcription factors
CTCF_HUMAN P63_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.06 1.43 0.860.02 1.86 n/a No Hit
P63_HUMAN 0.96 -0.18 0.031.00 1.35 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP arthritis including non-rheumatoid,  asthma,  college completion,  cystatin c in serum,  longstanding arthritis,  years of education
GTEx eQTL Brain_Cerebellum,  Brain_Nucleus_accumbens_basal_ganglia,  Cells_Cultured_fibroblasts,  Skin_Sun_Exposed_Lower_leg

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