rs686030 chr9:15304784 C>A
- Sequence
agccctctgaggttgacagacttg[C/A]tcaatcaaggtcaacagtcatggg
- ASB in cell types
- monocyte-derived dendritic cells monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.15 | 0.57 | 1.89 | -3.56 | Concordant |
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Motif analysis
Genetic associations
EMBL-EBI coenzyme q10 levels, gallstone disease, hdl cholesterol, metabolite levels (lipoprotein measures)
GRASP hdl cholesterol, hdl cholesterol change with statins, ldl cholesterol, total cholesterol, transmission distortion, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Liver, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Whole_Blood