rs688378 chr1:116596434 G>C
- Sequence
cgctggttcggagctctggtatcc[G/C]caagtcttagagccaccttgtggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) liver HUVEC-C (HUVEC, umbilical vein endothelial cells) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.66 | -0.38 | 1.73 | n/a | No Hit | |||
| RAD21_HUMAN | 2.31 | -0.71 | 1.30 | n/a | n/a |
Items per page:
1 – 2 of 2