rs688540 chr1:47536775 G>A

Sequence
ctccaatactactgaaatgtttgc[G/A]caatcttgaagcatttatttaaaa
ASB in cell types
HEK293 (embryonic kidney) 22RV1 (prostate carcinoma)
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN n/a 0.86 1.000.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI estimated glomerular filtration rate
GRASP asthma,  chronic kidney disease,  cystatin c in serum,  hdl cholesterol,  premature ovarian failure,  serum creatinine

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