rs688881 chr5:169826777 A>G

Sequence
ctacattgcaaagaactatgttgc[A/G]tgtttctcccagctggctctgcag
ASB in cell types
GM02630 (Fanconi anemi) GM19238 (female B-cells lymphoblastoid cell lines)
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.80 -0.33 5.8·10-51.00 1.00 n/a n/a
CTCF_HUMAN 1.18 0.12 1.8·10-31.00 1.48 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol

Download