rs691617 chr8:19171279 A>G
- Sequence
cagctggaaaatcagaacgcttgc[A/G]taacctctgcaatgatgcagaggg
- ASB in cell types
- SUM159PT (Triple negative breast cancer) Mel270 (Uveal melanoma)
- ASB for transcription factors
- CEBPB_HUMAN TCF21_HUMAN SMCA4_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.78 | 1.50 | 1.40 | 3.73 | Concordant | |||
| TCF21_HUMAN | 3.09 | -0.01 | 2.00 | n/a | No Hit | |||
| SMCA4_HUMAN | -0.83 | 2.05 | 1.00 | n/a | n/a | |||
| JUN_HUMAN | -0.14 | 2.03 | 1.00 | 2.84 | Concordant |
Items per page:
1 – 4 of 4
Motif analysis
