rs693162 chr4:83496396 T>C
- Sequence
actttctcctcacctccctctgtt[T/C]ccaagcggtcttatctgtgtttta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN MNT_HUMAN NCOR1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 0.99 | n/a | 2.00 | n/a | n/a | |||
| MNT_HUMAN | 2.35 | -0.34 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | 0.97 | -3.59 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 1.01 | n/a | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.46 | -5.34 | 2.00 | -4.43 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis