ADASTRA v6.1.0
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rs693646
chr6:10837927
G
>
C
Sequence
agtccggcgccgttgggggggacg[G/C]gggtgtgcggaattccactttcac
ASB in cell types
22RV1 (prostate carcinoma)
A549 (lung carcinoma)
ASB for transcription factors
ANDR_HUMAN
KDM2B_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
-0.19
3.07
0.76
6.9·10
-3
2.00
n/a
No Hit
KDM2B_HUMAN
-0.95
1.83
1.00
0.05
2.00
n/a
n/a
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol change with statins
GTEx eQTL
Nerve_Tibial
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)