rs6956237 chr7:120995877 C>T
- Sequence
gttttttttattcttcttcctctt[C/T]ttcttcttcttcttcttcttcctc
- ASB in cell types
- K562 (myelogenous leukemia) TALL1 (T-Acute Lymphoblastic Leukemia) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- ZN512_HUMAN SPI1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN512_HUMAN | n/a | 2.18 | 1.50 | n/a | n/a | |||
| SPI1_HUMAN | -0.77 | 2.03 | 1.47 | -0.24 | Weak Discordant | |||
| IKZF1_HUMAN | -1.94 | 2.40 | 1.75 | n/a | n/a |
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Motif analysis
