rs6957965 chr7:50197487 T>C

Sequence
tgccaactgcagattttcttagtc[T/C]gaagcaatgacatgactaaaactc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MTG16_HUMAN RING2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTG16_HUMAN -1.94 2.89 1.006.1·10-3 2.00 n/a n/a
RING2_HUMAN -4.94 2.87 1.000.03 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP arthritis including non-rheumatoid eye color fasting blood glucose ldl cholesterol ldl cholesterol change with statins longstanding arthritis sporadic creutzfeldt-jakob disease total cholesterol change with statins triglycerides
GTEx eQTL Pituitary Testis

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