rs6961005 chr7:159013147 C>T
- Sequence
ccaggagcatttggaggatgctgc[C/T]gttgggggccccaggctctgctgg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NR2C1_HUMAN COT1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | 3.61 | n/a | 1.25 | n/a | No Hit | |||
| COT1_HUMAN | 2.37 | n/a | 1.50 | n/a | No Hit | |||
| KDM1A_HUMAN | 1.97 | -0.82 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Colon_Sigmoid, Esophagus_Mucosa, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Testis, Thyroid