rs6961865 chr7:20267741 T>C
- Sequence
tttatttgagcaaacagcaattga[T/C]taattaggcagctccaaacaggaa
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) GM19239 (male B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN FLI1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.33 | 1.14 | 1.22 | n/a | No Hit | |||
| STAG1_HUMAN | -0.03 | 1.45 | 1.04 | n/a | n/a | |||
| FLI1_HUMAN | -0.68 | 1.79 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP suicide attempts in bipolar disorder (substance free), total cholesterol, urinary albumin-to-creatinine ratio