rs6962008 chr7:10940595 G>A
- Sequence
agctgcgcggcgcctctgggagcc[G/A]agcgccgggcgcctggagggcagg
- ASB in cell types
- HL-60 (acute myeloid leukemia) primary B-CLL cells adult erythroblasts
- ASB for transcription factors
- SKI_HUMAN INT13_HUMAN RBBP5_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SKI_HUMAN | -0.82 | 3.14 | 2.00 | n/a | n/a | |||
| INT13_HUMAN | -0.53 | 1.70 | 1.00 | n/a | n/a | |||
| RBBP5_HUMAN | 2.00 | n/a | 3.00 | n/a | n/a | |||
| BRD4_HUMAN | 1.52 | 0.09 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis