rs6962477 chr7:7920790 T>C
- Sequence
tcattctgtgagagcttttgtaat[T/C]ggctatgtaaattatctctcaggt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- COT1_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -2.24 | 2.67 | 1.00 | n/a | No Hit | |||
| REQU_HUMAN | -2.23 | 2.58 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Caudate_basal_ganglia, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Ovary, Small_Intestine_Terminal_Ileum, Testis, Thyroid