rs6965212 chr7:139341719 G>T
- Sequence
actcggggaccaaaggaccagcgg[G/T]ggggggcgcagagtcgctctgggg
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) tibial nerve HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- CREB1_HUMAN RFOX2_HUMAN EP300_HUMAN INT13_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | -0.27 | 1.51 | 1.30 | n/a | No Hit | |||
| RFOX2_HUMAN | -0.71 | 2.97 | 1.50 | n/a | n/a | |||
| EP300_HUMAN | 0.09 | 1.48 | 1.19 | n/a | n/a | |||
| INT13_HUMAN | 0.23 | 2.29 | 1.00 | n/a | n/a | |||
| ZBT7A_HUMAN | -2.06 | 2.21 | 1.50 | -1.11 | Weak Discordant |
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Motif analysis
