rs6966024 chr7:44885028 A>C
- Sequence
cggcccgccgccctcctcggcgcc[A/C]gccgccagctgctcggggctgcta
- ASB in cell types
- HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.38 | n/a | 1.00 | n/a | No Hit | |||
| TYY1_HUMAN | 0.52 | 2.56 | 1.67 | 0.73 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood